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rs10830963

Chromosome : 11 , Position: 92975544
Most conditions are affected by anywhere from hundreds to millions of genetic variants (SNPs). A single SNP usually has a minor contribution to a person’s overall genetic risk for a certain condition. That is why you shouldn't consider or act on a SNP in isolation. Instead, we use SNPs to determine polygenic risk scores (PRSs), which are the basis of most health reports.
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Reference AlleleC
Alternative Alleles:  T, G

Traits

Trait Variant Impact PMID Author (year)
Fasting blood glucose adjusted for BMI G
PLoS Genet Mahajan A (2015)
Birth weight of first child G
Unknown journal UKB Neale v2 (2018)
Birth weight G
Nature Horikoshi M (2016)
"Diabetes, insuline treatment (Kela reimbursement)" G
Unknown journal FINNGEN_R5 (2021)
"Diabetes, insuline treatment (Kela reimbursement)" (more controls excluded) G
Unknown journal FINNGEN_R5 (2021)
"Diabetes, varying definitions" G
Unknown journal FINNGEN_R5 (2021)
"Other diabetes, wide definition" G
Unknown journal FINNGEN_R5 (2021)
"Type 2 diabetes, definitions combined" G
Unknown journal FINNGEN_R5 (2021)
"Type 2 diabetes, definitions combined, including avohilmo" G
Unknown journal FINNGEN_R5 (2021)
"Type 2 diabetes, strict (exclude DM1)" G
Unknown journal FINNGEN_R5 (2021)
"Type 2 diabetes, wide definition" G
Unknown journal FINNGEN_R5 (2021)
Acute insulin response G
Diabetes Wood AR (2017)
Diabetes diagnosed by doctor G
Unknown journal UKB Neale v2 (2018)
Diabetes mellitus G
Unknown journal FINNGEN_R5 (2021)
Diabetes mellitus in pregnancy G
Unknown journal FINNGEN_R5 (2021)
Diabetes | non-cancer illness code, self-reported G
Unknown journal UKB Neale v2 (2018)
Fasting blood glucose G
Diabetologia Chung RH (2021)
Fasting blood glucose (BMI interaction) G
Nat Genet Manning AK (2012)
Fasting glucose G
Nat Genet Chen J (2021)
Fasting plasma glucose G
Nat Genet Prokopenko I (2008)
Fasting plasma glucose [Fasting glucose] G
Genet Epidemiol Rasmussen-Torvik LJ (2012)
Gestational diabetes (for exclusion) G
Unknown journal FINNGEN_R5 (2021)
Glucose homeostasis traits [AIRg] G
Diabetes Palmer ND (2014)
Glucose homeostasis traits [DI] G
Diabetes Palmer ND (2014)
Glycated hemoglobin levels G
PLoS Med Wheeler E (2017)
Glycemic traits (multi-trait analysis) G
Comput Math Methods Med Wu B (2018)
Glycemic traits (pleiotropy) G
Biometrics Masotti M (2019)
Hemoglobin A1c levels G
Nat Genet Kanai M (2018)
High fasting blood glucose G
PLoS One Oh SW (2020)
Incremental insulin G
PLoS Genet Prokopenko I (2014)
Insulin disposition index G
Diabetes Wood AR (2017)
Insulin levels adjusted for BMI G
PLoS Genet Prokopenko I (2014)
Maternal care for other conditions predominantly related to pregnancy G
Unknown journal FINNGEN_R5 (2021)
Metabolite levels [Glc] G
Nat Genet Kettunen J (2012)
Obesity-related traits [GLU ] G
PLoS One Comuzzie AG (2012)
Offspring birth weight G
Nat Genet Warrington NM (2019)
Other maternal disorders predominantly related to pregnancy G
Unknown journal FINNGEN_R5 (2021)
Peak insulin response G
Diabetes Wood AR (2017)
Pulse pressure G
Nat Genet Evangelou E (2018)
Serum metabolite levels (CMS) [Glc] G
Nat Commun Gallois A (2019)
Serum metabolite levels [Glc] G
Nat Commun Gallois A (2019)
Type 2 diabetes G
Nature Spracklen CN (2020)
Type 2 diabetes (adjusted for BMI) G
Nat Genet Mahajan A (2018)
Type 2 diabetes [EA] G
Nat Genet Zhao W (2017)
Type 2 diabetes with other specified/multiple/unspecified complications G
Unknown journal FINNGEN_R5 (2021)
Type 2 diabetes without complications G
Unknown journal FINNGEN_R5 (2021)

Summary

[type-2 diabetes in our Han Chinese cohort (OR 1.16, 95% CI 1.03-1.31, p = 0.015). As previously described, the risk variant was also associated with increased fasting plasma glucose, showing an increase of 0.068 mmol/l (95% CI 0.036-0.100, p = 4 x 10(-5)) per risk allele

[type-2 diabetes. Specifically, the (G) allele increased the risk of isolated impaired fasting glycemia (OR=1.64, P=5.5×10(-11)) but not isolated impaired glucose tolerance.

[PMID 21658282] 900+ patients with gestational diabetes were studied, and the rs10830963(G) SNP was postulated to perhaps be a causal SNP for the condition, with an odds ratio of ~1.3 – 1.4.


[PMID 19651812] Common genetic variation near melatonin receptor MTNR1B contributes to raised plasma glucose and increased risk of type-2 diabetes amongst Indian Asians and European whites

[PMID 19741166] Common Genetic Determinants of Glucose Homeostasis in Healthy Children: The European Youth Heart Study (EYHS)


[PMID 29089366] Subjects carrying the G allele of the circadian rhythm-related MTNR1B variant may present a bigger impact on total and LDL cholesterol when undertaking an energy-restricted low-fat diet.

 

[PMID 32057567] ‘G’ carriers reduce their LDL levels less than no-‘G’ carriers from a severely calorie-restricted diet or from a high-protein/low-carbohydrate diet.

 

[PMID 30981681] ‘G’ carriers reduce their LDL levels less than no-‘G’ carriers from hypocaloric diets rich in monounsaturated or polyunsaturated fat


[PMID 20536959] Two susceptible diabetogenic variants near/in MTNR1B are associated with fasting plasma glucose in a Han Chinese cohort

[PMID 20802253] Glycemia determines the effect of type 2 diabetes risk genes on insulin secretion

[PMID 20839289] Impact of repeated measures and sample selection on genome-wide association studies of fasting glucose


 

[PMID 21036910] Association of a fasting glucose genetic risk score with subclinical atherosclerosis: The Atherosclerosis Risk in Communities (ARIC) Study

[PMID 21059861] Association of a melatonin receptor 1B (MTNR1B) gene variant with fasting glucose and HOMA-B in children and adolescents of high BMI-SDS groups

[PMID 21470412] A common polymorphism rs3781637 in MTNR1B is associated with type 2 diabetes and lipids levels in Han Chinese individuals


[PMID 21949744] Effects of 16 Genetic Variants on Fasting Glucose and Type 2 Diabetes in South Asians: ADCY5 and GLIS3 Variants May Predispose to Type 2 Diabetes


[PMID 22096510] Association of six single nucleotide polymorphisms with gestational diabetes mellitus in a chinese population


[PMID 22450346] The rs10830963 variant of melatonin receptor MTNR1B is associated with increased risk for gestational diabetes mellitus in a Greek population


[PMID 22508271] Fasting Glucose GWAS Candidate Region Analysis Across Ethnic Groups in the Multiethnic Study of Atherosclerosis (MESA).


[PMID 22698518] Melatonin pathway genes are associated with progressive subtypes and disability status in multiple sclerosis among Finnish patients


[PMID 22768333] Association of Genetic Variants of Melatonin Receptor 1B with Gestational Plasma Glucose Level and Risk of Glucose Intolerance in Pregnant Chinese Women


[PMID 22768041] Allele Summation of Diabetes Risk Genes Predicts Impaired Glucose Tolerance in Female and Obese Individuals


[PMID 19184136] Examination of association of genes in the serotonin system to autism.


[PMID 19324937] Previously associated type 2 diabetes variants may interact with physical activity to modify the risk of impaired glucose regulation and type 2 diabetes: a study of 16,003 Swedish adults.


[PMID 19455304] Common genetic variation in the melatonin receptor 1B gene (MTNR1B) is associated with decreased early-phase insulin response.


[PMID 19502414] Association of 18 confirmed susceptibility loci for type 2 diabetes with indices of insulin release, proinsulin conversion, and insulin sensitivity in 5,327 nondiabetic Finnish men.


[PMID 19533084] Combined effects of single-nucleotide polymorphisms in GCK, GCKR, G6PC2 and MTNR1B on fasting plasma glucose and type 2 diabetes risk.


[PMID 19822575] Molecular interactions between HNF4a, FOXA2 and GABP identified at regulatory DNA elements through ChIP-sequencing.


[PMID 19937311] Common variants at the GCK, GCKR, G6PC2-ABCB11 and MTNR1B loci are associated with fasting glucose in two Asian populations.


[PMID 20043853] Prioritizing genes for follow-up from genome wide association studies using information on gene expression in tissues relevant for type 2 diabetes mellitus.


[PMID 20152958] A weighted false discovery rate control procedure reveals alleles at FOXA2 that influence fasting glucose levels.


[PMID 20398260] MTNR1B rs10830963 is associated with fasting plasma glucose, HbA1C and impaired beta-cell function in Chinese Hans from Shanghai.


[PMID 20628598] Common polymorphisms in MTNR1B, G6PC2 and GCK are associated with increased fasting plasma glucose and impaired beta-cell function in Chinese subjects.


[PMID 20664687] Single-nucleotide polymorphisms in chromosome 3p14.1- 3p14.2 are associated with susceptibility of type 2 diabetes with cataract.


[PMID 20668700] Effects of GCK, GCKR, G6PC2 and MTNR1B variants on glucose metabolism and insulin secretion.


[PMID 20712903] Obesity and diabetes genes are associated with being born small for gestational age: results from the Auckland Birthweight Collaborative study.


[PMID 20870969] Genetic predisposition to long-term nondiabetic deteriorations in glucose homeostasis: Ten-year follow-up of the GLACIER study.


[PMID 20959387] Association of rs10830963 and rs10830962 SNPs in the melatonin receptor (MTNR1B) gene among Han Chinese women with polycystic ovary syndrome.


[PMID 21278902] Genetic risk profiling for prediction of type 2 diabetes.


[PMID 21366812] Relationship between MTNR1B (melatonin receptor 1B gene) polymorphism rs10830963 and glucose levels in overweight children and adolescents.


[PMID 21380592] No effect by the common gene variant rs10830963 of the melatonin receptor 1B on the association between sleep disturbances and type 2 diabetes: results from the Nord-Trondelag Health Study.


[PMID 21558052] A low frequency variant within the GWAS locus of MTNR1B affects fasting glucose concentrations: Genetic risk is modulated by obesity.


[PMID 21711391] Association and evolutionary studies of the melatonin receptor 1B gene (MTNR1B) in the self-contained population of Sorbs from Germany.


[PMID 22377712] Association between type 2 diabetes genetic susceptibility loci and visceral and subcutaneous fat area as determined by computed tomography.


 


 


 

[PMID 22759724] Polymorphisms in the melatonin receptor 1B gene and the risk of delirium


[PMID 23029294] Meta-analysis of the relationship between common type 2 diabetes risk gene variants with gestational diabetes mellitus


[PMID 23690305] Genetic variants and the risk of gestational diabetes mellitus: a systematic review


[PMID 23840762] Large Scale Meta-Analyses of Fasting Plasma Glucose Raising Variants in GCK, GCKR, MTNR1B and G6PC2 and Their Impacts on Type 2 Diabetes Mellitus Risk


[PMID 24005634] [Involvement of melatonin MT2 receptor mutants in type 2 diabetes development]


[PMID 24157813] Association between Genetic Variations in MTNR1A and MTNR1B Genes and Gestational Diabetes Mellitus in Han Chinese Women


[PMID 23092954] SHAVE: shrinkage estimator measured for multiple visits increases power in GWAS of quantitative traits.


[PMID 23456907] Maternal genotype and gestational diabetes.


[PMID 23462794] Identification of CpG-SNPs associated with type 2 diabetes and differential DNA methylation in human pancreatic islets.


[PMID 23611530] Genetics of melatonin receptor type 2 is associated with left ventricular function in hypertensive patients treated according to guidelines.


[PMID 25132852] MTNR1B Genetic Variability Is Associated with Gestational Diabetes in Czech Women


[PMID 25707907] Season-dependent associations of circadian rhythm-regulating loci (CRY1, CRY2 and MTNR1B) and glucose homeostasis: the GLACIER Study


[PMID 25898821] The polymorphisms of melatonin receptor 1B gene (MTNR1B) (rs4753426 and rs10830963) and susceptibility to adolescent idiopathic scoliosis: a meta-analysis


[PMID 26440713] Common type 2 diabetes risk variant in MTNR1B worsens the deleterious effect of melatonin on glucose tolerance in humans


[PMID 26519818] Family association study between melatonin receptor gene polymorphisms and polycystic ovary syndrome in Han Chinese


[PMID 26551672] Genetic fine mapping and genomic annotation defines causal mechanisms at type 2 diabetes susceptibility loci.


[PMID 26563312] Relationship between melatonin receptor 1B (rs10830963 and rs1387153) with gestational diabetes mellitus: a case-control study and meta-analysis

More Information

 

Population Alleles Frequency

ethhicity frequency
T G
African/African-American 0.0707
Latino/Admixed American 0.2069
Ashkenazi Jewish 0.2448
East Asian 0.4312
European 0.2891
Other (population not assigned) 0.3278

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