SelfDecode uses the only scientifically validated genetic prediction technology for consumers. Read more

rs800292

Chromosome : 1 , Position: 196673103

Most conditions are affected by anywhere from hundreds to millions of genetic variants (SNPs). A single SNP usually has a minor contribution to a person’s overall genetic risk for a certain condition. That is why you shouldn't consider or act on a SNP in isolation. Instead, we use SNPs to determine polygenic risk scores (PRSs), which are the basis of most health reports.

Reference Allele: G

Alternative Alleles: A

Associated Genes

CFH

CFHR3

CFHR1

CFHR4

CFHR5

KCNT2

CFHR2

F13B

ASPM

Traits

Trait	Variant	PMID	Author (year)
Sub-foveal choroidal thickness	A	Proc Natl Acad Sci U S A	Hosoda Y (2018)
Matrix metalloproteinase-8 levels	A	Circ Cardiovasc Genet	Salminen A (2017)
Circulating myeloperoxidase levels (serum)	A	Hum Mol Genet	Reiner AP (2013)
Age-related macular degeneration (MTAG)	A	J Hum Genet	Han X (2020)
Neovascular age-related macular degeneration	A	J Hum Genet	Ruamviboonsuk P (2017)

Summary

rs800292 is a SNP in the complement factor H CFH gene; it has been linked to blindness in age related macular degeneration. This SNP is also known as 184G>A, I62V, or Val62Ile.

A haplotype of rs1061170 rs3753394 rs800292 rs1329428 (TGTC) was found to confer a significantly increased likelihood of exudative AMD [ARMD in Caucasians, but not in Japanese [PMID 16710702]

[PMID 18316707] A study of Chinese AMD patients reports that carriers of both rs11200638 and rs800292 risk alleles pushes the odds ratio for AMD up to 23x. Overall, an “extremely high” population attributable risk (PAR) of 78% reported for these SNPs.

[PMID 19187823] rs800292 was associated with polypoidal choroidal vasculopathy (PCV) in a study of 130 Japanese patients.

age related macular degeneration [PMID 15870199]

[PMID 20132989] Phenotype and Genotype Characteristics of Age-related Macular Degeneration in a Japanese Population

[PMID 20157352] Genetic analysis of typical wet-type age-related macular degeneration and polypoidal choroidal vasculopathy in Japanese population

[PMID 20538655] Polymorphisms in CFH, HTRA1 and CX3CR1 confer risk to exudative age-related macular degeneration in Han Chinese

[PMID 20678803] Complement Factor H and High-Temperature Requirement A-1 Genotypes and Treatment Response of Age-related Macular Degeneration

[PMID 22065918] CFH 184G as a genetic risk marker for anterior uveitis in Chinese females

[PMID 22509112] Genetic associations in polypoidal choroidal vasculopathy: A systematic review and meta-analysis

[PMID 22594510] Association of genetic polymorphisms with response to bevacizumab for neovascular age-related macular degeneration in the Chinese population

[PMID 16080115] Susceptibility genes for age-related maculopathy on chromosome 10q26.

[PMID 17022693] Determination of complement factor H functional polymorphisms (V62I, Y402H, and E936D) using sequence-specific primer PCR and restriction fragment length polymorphisms.

[PMID 17591627] Complement factor H and hemicentin-1 in age-related macular degeneration and renal phenotypes.

[PMID 17877809] Genetic variants of complement factor H gene are not associated with premature coronary heart disease: a family-based study in the Irish population.

[PMID 17962488] Coding and noncoding variants in the CFH gene and cigarette smoking influence the risk of age-related macular degeneration in a Japanese population.

[PMID 18043728] Haplotypes in the complement factor H (CFH) gene: associations with drusen and advanced age-related macular degeneration.

[PMID 18162041] Neovascular age-related macular degeneration risk based on CFH, LOC387715/HTRA1, and smoking.

[PMID 18421087] Multiple gene polymorphisms in the complement factor h gene are associated with exudative age-related macular degeneration in chinese.

[PMID 18515590] Association analysis of CFH, C2, BF, and HTRA1 gene polymorphisms in Chinese patients with polypoidal choroidal vasculopathy.

[PMID 18541031] The NEI/NCBI dbGAP database: genotypes and haplotypes that may specifically predispose to risk of neovascular age-related macular degeneration.

[PMID 18787502] Genetic contributions to the development of retinopathy of prematurity.

[PMID 19026761] Molecular pathology of age-related macular degeneration.

[PMID 19259132] Multilocus analysis of age-related macular degeneration.

[PMID 19823576] CFH, C3 and ARMS2 are significant risk loci for susceptibility but not for disease progression of geographic atrophy due to AMD.

[PMID 19861685] Association of factor H autoantibodies with deletions of CFHR1, CFHR3, CFHR4, and with mutations in CFH, CFI, CD46, and C3 in patients with atypical hemolytic uremic syndrome.

[PMID 19933189] Compound heterozygosity of two novel truncation mutations in RP1 causing autosomal recessive retinitis pigmentosa.

[PMID 19958499] A particle swarm based hybrid system for imbalanced medical data sampling.

[PMID 20157618] Complement component 3: an assessment of association with AMD and analysis of gene-gene and gene-environment interactions in a Northern Irish cohort.

[PMID 20161815] SERPING1 polymorphisms in polypoidal choroidal vasculopathy.

[PMID 20181037] Incorporating prior knowledge to facilitate discoveries in a genome-wide association study on age-related macular degeneration.

[PMID 20689796] Monozygotic twins with polypoidal choroidal vasuculopathy.

[PMID 21397333] Role of complement factor H I62V and age-related maculopathy susceptibility 2 A69S variants in the clinical expression of polypoidal choroidal vasculopathy.

[PMID 21609242] Age-related macular degeneration-susceptibility single nucleotide polymorphisms in a han chinese control population.

[PMID 21896867] Associations of complement factor H (CFH) and age-related maculopathy susceptibility 2 (ARMS2) genotypes with subtypes of polypoidal choroidal vasculopathy.

[PMID 21899915] Complement polymorphisms: geographical distribution and relevance to disease.

[PMID 21909106] Genome-wide association study identifies two susceptibility loci for exudative age-related macular degeneration in the Japanese population.

[PMID 22618592] Association of genetic polymorphisms and age-related macular degeneration in chinese population.

[PMID 23111182] Prevalence and genomic association of reticular pseudodrusen in age-related macular degeneration

[PMID 23582991] Genetic Influences on the Outcome of Anti-Vascular Endothelial Growth Factor Treatment in Neovascular Age-related Macular Degeneration

[PMID 23620142] Genome-wide and Gene-Centric Analyses of Circulating Myeloperoxidase Levels in the CHARGE and CARe Consortia

[PMID 23919682] Complement alternative pathway genetic variation and Dengue infection in the Thai population

[PMID 24393350] Genes in the High-Density Lipoprotein Metabolic Pathway in Age-Related Macular Degeneration and Polypoidal Choroidal Vasculopathy

[PMID 23864767] Association of CFH and CFB gene polymorphisms with retinopathy in type 2 diabetic patients

[PMID 22714898] Association of C2 and CFB polymorphisms with anterior uveitis.

[PMID 22936692] Can genetic associations change with age? CFH and age-related macular degeneration.

[PMID 23103884] Age-related macular degeneration and coronary heart disease: evaluation of genetic and environmental associations.

[PMID 23233260] Association between polymorphisms of complement pathway genes and age-related macular degeneration in a Chinese population.

[PMID 23289807] Gene-gene interactions of CFH and LOC387715/ARMS2 with Korean exudative age-related macular degeneration patients.

[PMID 23289808] The association of age-related maculopathy susceptibility 2 (ARMS2) and complement factor H (CFH) variants with two angiographic subtypes of polypoidal choroidal vasculopathy.

[PMID 24865190] Association of Specific Genetic Polymorphisms with Age-related Macular Degeneration in a Northern Chinese Population

[PMID 24865191] Genetic Variants in the SKIV2L Gene in Exudative Age-related Macular Degeneration in the Japanese Population

[PMID 24365176] Common variants in the complement factor H gene confer genetic susceptibility to central serous chorioretinopathy

[PMID 25612476] Investigating the CFH Gene Polymorphisms as a Risk Factor for Age-related Macular Degeneration in an Iranian Population

[PMID 24675670] Impact of the common genetic associations of age-related macular degeneration upon systemic complement component C3d levels

[PMID 26217379] Ancestry of the Timorese: age-related macular degeneration associated genotype and allele sharing among human populations from throughout the world

[PMID 26296146] PREVALENCE OF THE COMPLEMENT FACTOR H AND GSTM1 GENES POLYMORPHISMS IN PATIENTS WITH CENTRAL SEROUS CHORIORETINOPATHY

More Information