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  3. SHROOM2

SHROOM2 (Shroom family member 2)

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The Function of SHROOM2

May be involved in endothelial cell morphology changes during cell spreading. In the retinal pigment epithelium, may regulate the biogenesis of melanosomes and promote their association with the apical cell surface by inducing gamma-tubulin redistribution.

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Protein names

Recommended name:

Protein Shroom2

Alternative name(s):

Apical-like protein
Protein APXL

SHROOM2 SNPs

    To see your genotype, you should be logged in and have a file with your genotype uploaded.

  1. RS2405942 (SHROOM2) ??
  2. RS5934683 (SHROOM2) ??

Top Gene-Substance Interactions

Substances That Increase SHROOM2

Substances Interaction Organism Category

Substances That Decrease SHROOM2

Substances Interaction Organism Category

Conditions with Increased Gene Activity

Condition Change (log2fold) Comparison Species Experimental variables Experiment name

Conditions with Decreased Gene Activity

Condition Change (log2fold) Comparison Species Experimental variables Experiment name

Technical

The following transcription factors affect gene expression:

  • Brachyury
  • FOXC1
  • c-Myb

Tissue specificity:

Abundant in retina and melanoma; also in brain, placenta, lung, kidney and pancreas.

Molecular Function:

  • Actin Binding
  • Actin Filament Binding
  • Beta-Catenin Binding
  • Ligand-Gated Sodium Channel Activity

Biological Processes:

  • Apical Protein Localization
  • Brain Development
  • Camera-Type Eye Development
  • Camera-Type Eye Morphogenesis
  • Cellular Pigment Accumulation
  • Ear Development
  • Establishment Of Melanosome Localization
  • Eye Pigment Granule Organization
  • Lens Morphogenesis In Camera-Type Eye
  • Melanosome Organization
*synonyms

Synonyms/Aliases/Alternative Names of the Gene:

hypothetical protein| 4832440C16| Ab2-404| apical-like protein| APX homolog of Xenopus| Apxl| AS27_05018| AS28_13381| CB1_000066003| D623_10020254| H920_02983| HSAPXL| I79_015249| liver regeneration-related protein LRRG167| M91_11492| M959_03955| N300_02343| N301_00687| N302_15334| N305_04093| N306_06712| N307_00276| N308_12588| N309_06573| N320_09678| N321_06815| N322_12496| N324_05294| N325_00512| N327_07503| N328_11808| N329_01549| N330_03721| N332_06567| N333_07785| N334_09947| N339_11546| N341_02394| protein Apxl| Protein Shroom2| protein Shroom2-like| protein Shroom2-like protein| Shrm2| UY3_07453| Y1Q_000596| Y956_08383| Z169_11631| shroom2

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